Last login: Mon Aug 24 13:42:16 on ttys000
modah@nantes2026 ~ % man modah
MODAH(2026)User CommandsMODAH(2026)
- NAME
- modah — Modelling in Animal Health
- SYNOPSIS
- modah [COMMAND] [OPTIONS]...
- DESCRIPTION
- Bring together researchers interested in the development
and use of mathematical and computational models in
animal health. - OPTIONS
- --coffeeincrease connectivity
--collaboratestrongly recommended - SEE ALSO
- emulsion(1), epidemiology(1), networks(1), coffee(∞)
modah@nantes2026 ~ %
modah init \
--from 2026-08-24 \
--to 2026-08-27 \
--location Nantes \
--talks 27 \
--keynotes 2 \
--posters 34
Initializing ModAH Conference[ OK ]
Loading configuration[ OK ]
Setting dates: Aug 24–27, 2026[ OK ]
Setting location: Nantes, France[ OK ]
Registering talks: 27[ OK ]
Registering keynotes: 2[ OK ]
Registering posters: 34[ OK ]
__ __ _ _ _ _ ____ ___ ____ __ | \/ | ___ __| | / \ | | | | |___ \ / _ \___ \ / /_ | |\/| |/ _ \ / _` | / _ \ | |_| | __) | | | |__) | '_ \ | | | | (_) | (_| |/ ___ \| _ | / __/| |_| / __/| (_) | |_| |_|\___/ \__,_/_/ \_\_| |_| |_____|\___/_____|\___/
Conference environment initialized.
modah@nantes2026 ~ % tree conference/
zsh: command not found: tree
modah@nantes2026 ~ % brew install tree
==> Installing tree
🍺 tree installed successfully
modah@nantes2026 ~ % tree conference/
conference/
├── Monday_24
│ └── emulsion_workshop.yml
├── Tuesday_25
│ ├── modah_hub
│ ├── lunch
│ ├── opening
│ ├── keynote_01
│ ├── spatial_invasion
│ │ └── session.log
│ ├── flash_posters
│ ├── coffee
│ └── cattle_health
│ └── session.log
├── Wednesday_26
│ ├── fun_run
│ ├── wildlife_epidemiology
│ │ └── session.log
│ ├── flash_posters
│ ├── coffee_am
│ ├── swine_endemic_diseases
│ │ └── session.log
│ ├── lunch
│ ├── keynote_02
│ ├── networks_and_inference
│ │ └── session.log
│ ├── coffee_pm
│ ├── avian_influenza
│ │ └── session.log
│ └── gala
└── Thursday_27
├── vector_borne_diseases
│ └── session.log
├── coffee
├── african_swine_fever
│ └── session.log
├── closing
└── lunch
conference status: checking…
modah@nantes2026 ~ % cd conference/Monday_24
Monday · August 24, 2026
EMULSION workshop
modah@nantes2026 Monday_24 % ls
modah@nantes2026 Monday_24 % emulsion run emulsion_workshop.yml
Loading EMULSION[ OK ]
Reading emulsion_workshop.yml[ OK ]
Checking model structure[ OK ]
Initializing participants[ OK ]
[WORKSHOP] Emulsion workshop
14:0017:00
Write epidemiological models as models, not as code.
modah@nantes2026 Monday_24 % cd ..
modah@nantes2026 conference % cd Tuesday_25
Tuesday · August 25, 2026
ModAH Conference · Day 1
modah@nantes2026 Tuesday_25 % ls
09:00 modah_hub 12:20 lunch 13:45 opening 14:00 keynote_01 14:45 spatial_invasion 15:45 flash_posters 16:05 coffee 17:00 cattle_health
modah@nantes2026 Tuesday_25 % ./modah_hub --discover
Loading ModAH Hub[ OK ]
Connecting participants[ OK ]
[SATELLITE EVENT] ModAH Hub satellite event
09:0012:20
Discover the ModAH Hub initiative
modah@nantes2026 Tuesday_25 % make lunch
Preparing lunch[ OK ]
Serving participants[ OK ]
[BREAK]
12:2013:45
Lunch break
modah@nantes2026 Tuesday_25 % ./opening
Starting ModAH Conference 2026[ OK ]
[OPENING]
13:4514:00
modah@nantes2026 Tuesday_25 % cat keynote_01
[KEYNOTE #1]
14:0014:45
Barbara Han
Multiscale data integration for predictive modeling of zoonotic disease
modah@nantes2026 Tuesday_25 % cat spatial_invasion/session.log
[SESSION] Spatial invasion and disease spread in connected landscapes
14:45 → 15:05Samuel Shute
Assessing the impact of epidemiological indicators on aquatic animal disease dispersal using a coupled hydrodynamic-particle tracking model
15:05 → 15:25Claire Guinat
Cryptic invasion and evolutionary dynamics of peste des petits ruminants virus across Europe
15:25 → 15:45Jules Trillaud
Mitigating the Impact of OsHV-1 on Pacific Oyster Production Using a Spatial Compartmental Modelling Approach
modah@nantes2026 Tuesday_25 % ./flash_posters
Loading presenters[ OK ]
Setting runtimeshort
[FLASH POSTER PITCH]
15:4516:05
modah@nantes2026 Tuesday_25 % ping coffee
PING coffee (127.0.0.1)
64 bytes from coffee: time=0.42 ms
64 bytes from coffee: time=0.31 ms
coffee is reachable
[BREAK]
16:0517:00
modah@nantes2026 Tuesday_25 % cat cattle_health/session.log
[SESSION] Cattle health: transmission, control and decision support
17:00 → 17:20Casey Miriam
Heterogeneity in transmission and diagnosis of Mycobacterium bovis in Irish cattle herds
17:20 → 17:40Picault Sébastien
Connect'BRD: A sensor-informed mechanistic modelling framework for decision support in bovine respiratory disease management
17:40 → 18:00De Oliveira Nogueira Pedro
Epidemiological impact of Neospora caninum in Victorian Dairy Farms: Modelling Effective Control Strategies
18:00 → 18:20Delecroix Clara
Selective culling and the potential persistence of lumpy skin disease in cattle herds: insights from a mechanistic transmission model
modah@nantes2026 Tuesday_25 % cd ..
modah@nantes2026 conference % cd Wednesday_26
Wednesday · August 26, 2026
ModAH Conference · Day 2
modah@nantes2026 Wednesday_26 % ls
07:00 fun_run 09:00 wildlife_epidemiology 10:00 flash_posters 10:20 coffee_am 11:00 swine_endemic_diseases 12:00 lunch 13:40 keynote_02 14:25 networks_and_inference 15:45 coffee_pm 16:45 avian_influenza 19:30 gala
modah@nantes2026 Wednesday_26 % ./fun_run --distance 5..10km
Initializing runners[ OK ]
Loading Île de Nantes[ OK ]
[SOCIAL] ModAH fun run
07:0008:00
A 5–10 km run around the Île de Nantes
modah@nantes2026 Wednesday_26 % cat wildlife_epidemiology/session.log
[SESSION] Wildlife epidemiology
09:00 → 09:20Belchior Emmanuel
Modelling the within-host dynamics of immunological markers for Mycobacterium bovis infection in European badgers (Meles meles)
09:20 → 09:40Luisiere Tistou
Dynamics of gastro-intestinal nematodes' resistance to anthelmintics at the interface between ibex and sheep populations on alpine pastures
09:40 → 10:00Shapiro Julie Teresa
Artificial intelligence and modeling for real-time monitoring of the health and welfare of captive foxes
modah@nantes2026 Wednesday_26 % ./flash_posters
Loading presenters[ OK ]
Setting runtimeshort
[FLASH POSTER PITCH]
10:0010:20
modah@nantes2026 Wednesday_26 % ping coffee
PING coffee (127.0.0.1)
64 bytes from coffee: time=0.25 ms
64 bytes from coffee: time=0.19 ms
coffee is reachable
[BREAK]
10:2011:00
modah@nantes2026 Wednesday_26 % cat swine_endemic_diseases/session.log
[SESSION] Swine endemic diseases: transmission and vaccination
11:00 → 11:20Mtaallah Oumaima
Evaluation of different vaccination strategies against enzootic swine influenza A in a seven-batch farrow-to-finish French farm system
11:20 → 11:40Gangsei Lars Erik
Bayesian simulation of pig trading networks applying categorical and spatial priors
11:40 → 12:00Sagrera Mònica
Timing matters: modelling the interplay among maternally derived antibodies, prevalence of infection and pcv2 vaccination in swine
modah@nantes2026 Wednesday_26 % make lunch
Preparing lunch[ OK ]
[BREAK]
12:0013:40
Lunch break
modah@nantes2026 Wednesday_26 % cat keynote_02
[KEYNOTE #2]
13:4014:25
Arjan Stegeman
Making Model Matter: from model output to decision support
modah@nantes2026 Wednesday_26 % cat networks_and_inference/session.log
[SESSION] Networks and inference methods for epidemic systems
14:25 → 14:45Henriot Paul
Fewer holdings, persistent connectivity: long-term structural change in the French cattle movement network and implications for pathogen spread
14:45 → 15:05Borodziuk Kacper
An agent-based model of bovine tuberculosis transmission dynamics in high-risk cattle herds in Northern Ireland
15:05 → 15:25Qin Tianjian
From Livestock Movements to Infection Dynamics: Mechanism-Informed Learning for Synthetic Contact Networks
15:25 → 15:45Mraikh Nouhaila
ASPIRE: A Domain-Specific Language for Sensitivity Analysis and Parameter Inference in Epidemiological Models
modah@nantes2026 Wednesday_26 % git status
On branch ModAH2026
Your branch is up to date with 'origin/ModAH2026'.
Changes not staged for commit:
modified: caffeine_level [ CRITICAL ]
modified: attention_span [ LOW ]
Untracked files:
coffee_needed
no changes added to commit
modah@nantes2026 Wednesday_26 % ping coffee
PING coffee (127.0.0.1)
64 bytes from coffee: time=0.18 ms
64 bytes from coffee: time=0.15 ms
coffee connection stable
[BREAK]
15:4516:45
modah@nantes2026 Wednesday_26 % cat avian_influenza/session.log
[SESSION] Avian influenza: dynamics, risk and preparedness
16:45 → 17:05Pinotti Francesco
Connecting the dots: estimating the amplification of H9N2 AIV along poultry production and distribution networks in Bangladesh
17:05 → 17:25Hayes Brandon
The HPAI Modelling Challenge: A global initiative to improve animal health epidemic preparedness and response
17:25 → 17:45Comper Reilly
A meta-population disease model for the transmission of highly pathogenic avian influenza H5N1 within and between dairy herds in Ontario, Canada to assess the potential risk of pathogen spillover to dairy workers
17:45 → 18:05Volmer Kilian
Leveraging High-Performance Computing for swift Calibration - A case study for the HPAI modelling challenge
modah@nantes2026 Wednesday_26 % chmod +x gala
modah@nantes2026 Wednesday_26 % ./gala
Loading Quai West[ OK ]
Connecting participants[ OK ]
Initializing cocktail dinner[ OK ]
Starting networking service[ OK ]
[SOCIAL] Gala dinner
19:30 → ∞
Quai West · Île de Nantes · overlooking the Loire
Cocktail dinner and networking evening
modah@nantes2026 Wednesday_26 % cd ..
modah@nantes2026 conference % cd Thursday_27
Thursday · August 27, 2026
ModAH Conference · Day 3
modah@nantes2026 Thursday_27 % ls
09:20 vector_borne_diseases 10:20 coffee 11:20 african_swine_fever 12:20 closing 13:00 lunch
modah@nantes2026 Thursday_27 % cat vector_borne_diseases/session.log
[SESSION] Vector-borne disease systems
09:20 → 09:40Gjaltema Sara N
Reconstructing the silent spillover of USUV and WNV in the Netherlands: insights from a multi-species serocatalytic model
09:40 → 10:00Hammami Pachka
Impact of recent climate on Bluetongue and Epizootic Hemorrhagic Disease Virus emergence in France
10:00 → 10:20Kumar Viney
A multi-layer network-based modeling framework for epizootic hemorrhagic disease transmission in France
modah@nantes2026 Thursday_27 % ping coffee
PING coffee (127.0.0.1)
64 bytes from coffee: time=0.16 ms
64 bytes from coffee: time=0.14 ms
coffee connection stable
[BREAK]
10:2011:20
modah@nantes2026 Thursday_27 % cat african_swine_fever/session.log
[SESSION] African swine fever: from wildlife reservoirs to farm control
11:20 → 11:40Acosta Alfredo
Decision Support Modelling for ASF intervention: Dynamics and Optimization in Wild Boar Populations in West-Central Germany
11:40 → 12:00Sicard Vianney
The Trojan Boar: modelling vaccine-derived ASF emergence under discontinuous live attenuated vaccination campaigns in wild boar
12:00 → 12:20Satici Muhammed
Optimizing sampling and diagnostic testing protocols for African swine fever detection in swine farms
modah@nantes2026 Thursday_27 % ./closing
Preparing final session[ OK ]
[CLOSING]
12:2013:00
Pauline Ezanno
A decade of ModAH: From connected disease models to a connected modelling ecosystem
modah@nantes2026 Thursday_27 % make lunch --takeaway
Preparing takeaway lunches[ OK ]
[INFO]
13:00 → Takeaway lunch provided
modah@nantes2026 Thursday_27 % cd ~
modah@nantes2026 ~ % git status
On branch ModAH2026
Your branch is up to date with 'origin/ModAH2026'.
nothing to commit, working tree clean
interactive shell · try help, now or coffee
modah@nantes2026 ~ % exit
Saving models[ OK ]
Saving new collaborations[ OK ]
Saving conference history[ OK ]
logout
Connection to nantes2026 closed.